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1

Where microbiology meets microengineering: design and applications of reporter bacteria

van der Meer, Jan Roelof, Belkin, Shimshon

Journal:

Nature Reviews Microbiology

Year:

2010

Language:

english

File:

PDF, 540 KB

english, 2010

2

Probing chemotaxis activity in Escherichia coli using fluorescent protein fusions

Roggo, Clémence, Carraro, Nicolas, van der Meer, Jan Roelof

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 6.73 MB

english, 2019

3

Effect of two types of biosurfactants on phenanthrene availability to the bacterial bioreporterBurkholderia sartisolistrain RP037

Robin Tecon, Jan Roelof van der Meer

Journal:

Applied Microbiology and Biotechnology

Year:

2010

Language:

english

File:

PDF, 276 KB

english, 2010

4

Genomic islands and the evolution of catabolic pathways in bacteria

Jan Roelof van der Meer, Vladimir Sentchilo

Journal:

Current Opinion in Biotechnology

Year:

2003

Language:

english

File:

PDF, 149 KB

english, 2003

5

Mutant HbpR transcription activator isolation for 2-chlorobiphenyl via green fluorescent protein-based flow cytometry and cell sorting

Siham Beggah, Christelle Vogne, Elena Zenaro, Jan Roelof Van Der Meer

Journal:

Microbial Biotechnology

Year:

2008

Language:

english

File:

PDF, 658 KB

english, 2008

6

Diarrhea caused by enterotoxigenic Escherichia coli infection of humans is inhibited by dietary calcium

Ingeborg M.J Bovee-Oudenhoven, Mischa L.G Lettink-Wissink, Wim Van Doesburg, Ben J.M Witteman, Roelof Van Der Meer

Journal:

Gastroenterology

Year:

2003

Language:

english

File:

PDF, 152 KB

english, 2003

7

Transcriptional profiling of Gram-positive A rthrobacter in the phyllosphere: induction of pollutant degradation genes by natural plant phenolic compounds

Scheublin, Tanja R., Deusch, Simon, Moreno-Forero, Silvia K., Müller, Jochen A., van der Meer, Jan Roelof, Leveau, Johan H. J.

Journal:

Environmental Microbiology

Year:

2014

Language:

english

File:

PDF, 453 KB

english, 2014

8

Colonization of aerobic biofilms by sulfate‐reducing bacteria

Power, Mary E, Van Der Meer, Jan Roelof, Harms, Hauke, Wanner, Oskar

Journal:

Year:

2001

Language:

english

File:

PDF, 1.18 MB

english, 2001

9

Effects of supplemental dietary calcium on the intestinal association of calcium, phosphate, and bile acids

Van Der Meer, Roelof, Welberg, Johannes W.M., Kuipers, Folkert, Kleibeuker, Jan H., Mulder, Nanno H., Termont, Denise S.M.L., Vonk, Roel J., de Vries, Hielke T., de Vries, Elisabeth G.E.

Journal:

Gastroenterology

Year:

1990

Language:

english

File:

PDF, 907 KB

english, 1990

10

Quantitative chemical biosensing by bacterial chemotaxis in microfluidic chips

Roggo, Clémence, Picioreanu, Cristian, Richard, Xavier, Mazza, Christian, van Lintel, Harald, van der Meer, Jan Roelof

Journal:

Environmental Microbiology

Year:

2017

Language:

english

File:

PDF, 29.79 MB

english, 2017

11

Fatigue is associated with altered monitoring and preparation of physical effort in patients with chronic fatigue syndrome

van der Schaaf, Marieke E., Roelofs, Karin, de Lange, Floris P., Geurts, Dirk EM., van der Meer, Jos WM., Knoop, Hans, Toni, Ivan

Journal:

Biological Psychiatry: Cognitive Neuroscience and Neuroimaging

Year:

2018

Language:

english

File:

PDF, 1.88 MB

english, 2018

12

Dietary Fructooligosaccharides Increase Intestinal Permeability in Rats

Ten Bruggencate, Sandra J. M., Bovee-Oudenhoven, Ingeborg M. J., Lettink-Wissink, Mischa L. G., Van der Meer, Roelof

Journal:

Journal of Nutrition

Year:

2005

Language:

english

File:

PDF, 208 KB

english, 2005

13

Thermogravimetric analysis of vinylacetate-vinylbutyrate copolymers

Roelof van der Meer, Anton L. German

Journal:

Macromolecular Materials and Engineering

Year:

1976

Language:

english

File:

PDF, 370 KB

english, 1976

14

Inhibition of toll-like receptor 4 breaks the inflammatory loop in autoimmune destructive arthritis

Shahla Abdollahi-Roodsaz, Leo A. B. Joosten, Mieke F. Roelofs, Timothy R. D. J. Radstake, Giovanni Matera, Calin Popa, Jos W. M. van der Meer, Mihai G. Netea, Wim B. van den Berg

Journal:

Arthritis & Rheumatism

Year:

2007

Language:

english

File:

PDF, 647 KB

english, 2007

15

Supplemental antioxidants do not ameliorate colitis development in HLA-B27 transgenic rats despite extremely low glutathione levels in colonic mucosa

Marloes A.A. Schepens, Carolien Vink, Arjan J. Schonewille, Hennie M.J. Roelofs, Robert-Jan Brummer, Roelof van der Meer, Ingeborg M.J. Bovee-Oudenhoven

Journal:

Inflammatory Bowel Diseases

Year:

2011

Language:

english

File:

PDF, 280 KB

english, 2011

16

Bioreporters: gfp versus lux revisited and single-cell response

Stefanie Kohlmeier, Matthew Mancuso, Robin Tecon, Hauke Harms, Jan Roelof van der Meer, Mona Wells

Journal:

Biosensors and Bioelectronics

Year:

2007

Language:

english

File:

PDF, 720 KB

english, 2007

17

Analytics with engineered bacterial bioreporter strains and systems

Jan Roelof van der Meer

Journal:

Current Opinion in Biotechnology

Year:

2006

Language:

english

File:

PDF, 63 KB

english, 2006

18

Information from single-cell bacterial biosensors: what is it good for?

Robin Tecon, Jan Roelof van der Meer

Journal:

Current Opinion in Biotechnology

Year:

2006

Language:

english

File:

PDF, 352 KB

english, 2006

19

Let the sun shine

Jan Roelof van der Meer

Journal:

Current Opinion in Biotechnology

Year:

2010

Language:

english

File:

PDF, 90 KB

english, 2010

20

Dynamics of multigene expression during catabolic adaptation of Ralstonia eutropha JMP134 (pJP4) to the herbicide 2,4-dichlorophenoxyacetate

Johan H. J. Leveau, Franziska König, Hanspeter Füchslin, Christoph Werlen, Jan Roelof Van Der Meer

Journal:

Molecular Microbiology

Year:

1999

Language:

english

File:

PDF, 547 KB

english, 1999

21

Measuring mass transfer processes of octane with the help of an alkSalkB::gfp-tagged Escherichia coli

Marco C. M. Jaspers, Christoph Meier, Alexander J. B. Zehnder, Hauke Harms, Jan Roelof Van Der Meer

Journal:

Environmental Microbiology

Year:

2001

Language:

english

File:

PDF, 3.23 MB

english, 2001

22

Community shifts in a seeded 3-chlorobenzoate degrading membrane biofilm reactor: indications for involvement of in situ horizontal transfer of the clc-element from inoculum to contaminant bacteria

Dirk Springael, Kurt Peys, Annemie Ryngaert, Sandra Van Roy, Liliane Hooyberghs, Roald Ravatn, Marc Heyndrickx, Jan-Roelof van der Meer, Carlo Vandecasteele, Max Mergeay, Ludo Diels

Journal:

Environmental Microbiology

Year:

2002

Language:

english

File:

PDF, 555 KB

english, 2002

23

Evolution of a chlorobenzene degradative pathway among bacteria in a contaminated groundwater mediated by a genomic island in Ralstonia

Tina Andrea Müller, Christoph Werlen, Jim Spain, Jan Roelof Van Der Meer

Journal:

Environmental Microbiology

Year:

2003

Language:

english

File:

PDF, 845 KB

english, 2003

24

Effect of integration of a GFP reporter gene on fitness of Ralstonia eutropha during growth with 2,4-dichlorophenoxyacetic acid

Hans Peter Füchslin, Irene Rüegg, Jan Roelof Van Der Meer, Thomas Egli

Journal:

Environmental Microbiology

Year:

2003

Language:

english

File:

PDF, 224 KB

english, 2003

25

Transcriptome and membrane fatty acid analyses reveal different strategies for responding to permeating and non-permeating solutes in the bacteriumSphingomonas wittichii

David R Johnson, Edith Coronado, Silvia K Moreno-Forero, Hermann J Heipieper, Jan Roelof van der Meer

Journal:

BMC Microbiology

Year:

2011

Language:

english

File:

PDF, 222 KB

english, 2011

26

Intestinal barrier function in response to abundant or depleted mucosal glutathione inSalmonella-infected rats

Marleen TJ van Ampting, Arjan J Schonewille, Carolien Vink, Robert Jan M Brummer, van der Roelof Meer, Ingeborg MJ Bovee-Oudenhoven

Journal:

Year:

2009

Language:

english

File:

PDF, 1.16 MB

english, 2009

27

The role of the small intestine in the development of dietary fat-induced obesity and insulin resistance in C57BL/6J mice

Nicole JW de Wit, Hanneke Bosch-Vermeulen, Philip J de Groot, Guido JEJ Hooiveld, Mechteld M Grootte Bromhaar, Jenny Jansen, Michael Müller, Roelof van der Meer

Journal:

BMC Medical Genomics

Year:

2008

Language:

english

File:

PDF, 473 KB

english, 2008

28

Theclcelement ofPseudomonassp. strain B13 and other mobile degradative elements employing phage-like integrases

Jan Roelof van der Meer, Roald Ravatn, Vladimir Sentchilo

Journal:

Archives of Microbiology

Year:

2001

Language:

english

File:

PDF, 139 KB

english, 2001

29

Development of bacteria-based bioassays for arsenic detection in natural waters

Elizabeth Diesel, Madeline Schreiber, Jan Roelof van der Meer

Journal:

Analytical and Bioanalytical Chemistry

Year:

2009

Language:

english

File:

PDF, 225 KB

english, 2009

30

Seasonal Fluctuations of Bacterial Community Diversity in Agricultural Soil and Experimental Validation by Laboratory Disturbance Experiments

Christoph Meier, Bernhard Wehrli, Jan Roelof van der Meer

Journal:

Microbial Ecology

Year:

2008

Language:

english

File:

PDF, 639 KB

english, 2008

31

Whole-cell living biosensors—are they ready for environmental application?

Hauke Harms, Mona C. Wells, Jan Roelof van der Meer

Journal:

Applied Microbiology and Biotechnology

Year:

2006

Language:

english

File:

PDF, 177 KB

english, 2006

32

Optimization of preservation conditions of As (III) bioreporter bacteria

Anke Kuppardt, Antonis Chatzinotas, Uta Breuer, Jan Roelof van der Meer, Hauke Harms

Journal:

Applied Microbiology and Biotechnology

Year:

2009

Language:

english

File:

PDF, 178 KB

english, 2009

33

Response Characteristics of Arsenic-Sensitive Bioreporters Expressing thegfpReporter Gene

Mona Wells, Michael Gösch, Hauke Harms, Jan Roelof van der Meer

Journal:

Microchimica Acta

Year:

2005

Language:

english

File:

PDF, 329 KB

english, 2005

34

Effect of Groundwater Composition on Arsenic Detection by Bacterial Biosensors

Hauke Harms, Julien Rime, Olivier Leupin, Stephan J. Hug, Jan Roelof van der Meer

Journal:

Microchimica Acta

Year:

2005

Language:

english

File:

PDF, 138 KB

english, 2005

35

Enhanced biodegradation of hexachlorocyclohexane (HCH) in contaminated soils via inoculation withSphingobium indicumB90A

Vishakha Raina, Mrutyunjay Suar, Ajaib Singh, Om Prakash, Mandeep Dadhwal, Sanjay Kumar Gupta, Charu Dogra, Kirsten Lawlor, Sukanya Lal, Jan Roelof van der Meer, Christof Holliger, Rup Lal

Journal:

Year:

2008

Language:

english

File:

PDF, 431 KB

english, 2008

36

Ileal Mucosal and Fecal Pancreatitis Associated Protein Levels Reflect Severity of Salmonella Infection in Rats

Marleen T. J. van Ampting, Wendy Rodenburg, Carolien Vink, Evelien Kramer, Arjan J. Schonewille, Jaap Keijer, Roelof van der Meer, Ingeborg M. J. Bovee-Oudenhoven

Journal:

Digestive Diseases and Sciences

Year:

2009

Language:

english

File:

PDF, 373 KB

english, 2009

37

Dietary modulation and structure prediction of rat mucosal pentraxin (Mptx) protein and loss of function in humans

Cindy van der Meer-van Kraaij, Roland Siezen, Evelien Kramer, Marjolein Reinders, Hans Blokzijl, Roelof van der Meer, Jaap Keijer

Journal:

Genes & Nutrition

Year:

2007

Language:

english

File:

PDF, 465 KB

english, 2007

38

Maturation pathway of nisin and other lantibiotics: post-translationally modified antimicrobial peptides exported by Gram-positive bacteria

Willem M. De Vos, Oscar P. Kuipers, Jan Roelof Van Der Meer, Roland J. Siezen

Journal:

Molecular Microbiology

Year:

1995

Language:

english

File:

PDF, 1.25 MB

english, 1995

39

Intracellular excision and reintegration dynamics of the ICEclc genomic island of Pseudomonas knackmussii sp. strain B13

Vladimir Sentchilo, Kamila Czechowska, Nicolas Pradervand, Marco Minoia, Ryo Miyazaki, Jan Roelof Van Der Meer

Journal:

Molecular Microbiology

Year:

2009

Language:

english

File:

PDF, 553 KB

english, 2009

40

A dual functional origin of transfer in the ICEclc genomic island of Pseudomonas knackmussii B13

Ryo Miyazaki, Jan Roelof van der Meer

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 774 KB

english, 2011

41

Design of new promoters and of a dual-bioreporter based on cross-activation by the two regulatory proteins XylR and HbpR

David Tropel, Alexandra Bähler, Kathrin Globig, Jan Roelof Van Der Meer

Journal:

Environmental Microbiology

Year:

2004

Language:

english

File:

PDF, 231 KB

english, 2004

42

Illuminating the detection chain of bacterial bioreporters

Jan Roelof Van Der Meer, David Tropel, Marco Jaspers

Journal:

Environmental Microbiology

Year:

2004

Language:

english

File:

PDF, 488 KB

english, 2004

43

A new green fluorescent protein-based bacterial biosensor for analysing phenanthrene fluxes

Robin Tecon, Mona Wells, Jan Roelof Van Der Meer

Journal:

Environmental Microbiology

Year:

2006

Language:

english

File:

PDF, 1.06 MB

english, 2006

44

Toxicity of triclosan, penconazole and metalaxyl on Caulobacter crescentus and a freshwater microbial community as assessed by flow cytometry

David R. Johnson, Kamila Czechowska, Nathalie Chèvre, Jan Roelof Van Der Meer

Journal:

Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 337 KB

english, 2009

45

Development of bioreporter assays for the detection of bioavailability of long-chain alkanes based on the marine bacterium Alcanivorax borkumensis strain SK2

Rekha Kumari, Robin Tecon, Siham Beggah, Rebecca Rutler, J. Samuel Arey, Jan Roelof van der Meer

Journal:

Environmental Microbiology

Year:

2011

Language:

english

File:

PDF, 1.16 MB

english, 2011

46

Bacterial community structure of a pesticide-contaminated site and assessment of changes induced in community structure during bioremediation

Debarati Paul, Gunjan Pandey, Christoph Meier, Jan Roelof van der Meer, Rakesh K. Jain

Journal:

FEMS Microbiology Ecology

Year:

2006

Language:

english

File:

PDF, 685 KB

english, 2006

47

Mannose-specific interaction of Lactobacillus plantarum with porcine jejunal epithelium

Gabriele Gross, Jan Van Der Meulen, Johannes Snel, Roelof Van Der Meer, Michiel Kleerebezem, Theo A. Niewold, Marcel M. Hulst, Mari A. Smits

Journal:

FEMS Immunology & Medical Microbiology

Year:

2008

Language:

english

File:

PDF, 279 KB

english, 2008

48

Degradation of low concentrations of dichlorobenzenes and 1,2,4-trichlorobenzene by Pseudomonas sp. strain P51 in nonsterile soil columns

Jan Roelof van der Meer, Wim Roelofsen, Gosse Schraa, Alexander J.B. Zehnder

Journal:

FEMS Microbiology Letters

Year:

1987

Language:

english

File:

PDF, 785 KB

english, 1987

49

Quantification of bacterial mRNA involved in degradation of 1,2,4-trichlorobenzene by Pseudomonas sp. strain P51 from liquid culture and from river sediment by reverse transcriptase PCR (RT/PCR)

Rainer Meckenstock, Patrick Steinle, Jan Roelof van der Meer, Mario Snozzi

Journal:

FEMS Microbiology Letters

Year:

1998

Language:

english

File:

PDF, 255 KB

english, 1998

50

Genetic adaptation of bacteria to chlorinated aromatic compounds

Jan Roelof van der Meer

Journal:

FEMS Microbiology Reviews

Year:

1994

Language:

english

File:

PDF, 883 KB

english, 1994

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